Data for: Unlocking the agro-physiological potential of wheat rhizoplane fungi using a niche-conservatism consortium construction approach under low P conditions
Data en bronnen
Data is not yet available. Contact the author for more information
This Dataset is currently private and won't be accessible to anyone outside the organization.
If you want to publish this dataset, please send an email to data.stewards@rothamsted.ac.uk
This dataset contains data files used and generated for the analysis in Benbrik et al., 2025.
Files for QIIME2 The following files are required for importing into QIIME2 to create a taxonomy database from cultured isolates:
* `isolate-ASVs.txt` - ITS sequences from fungal isolates * `isolate-taxonomy.txt` - Taxonomic classifications of fungal isolates
Sample metadata for rhizoplane sequence analysis, sequences can be found in the NCBI, accession number: PRJNA1067980. * `metadata.tsv` - Sample metadata validated with Keemei
## Files for R These files are QIIME2 outputs for creating a phyloseq object with corresponding sample data:
* `ASVs_abundance.txt` - Contains amplicon sequence variant (ASV) abundances * `ASVs_taxonomy_isolates.csv` - Taxonomic classifications from the isolate database * `ASVs_taxonomy_unite.csv` - Taxonomic classifications from UNITE database (v9.0) * `tree.nwk` - Rooted phylogenetic tree in Newick format * `metadata.csv` - Sample metadata
Methods
Technical Information
Simple Leaflet Map
Spatial Information
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